Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814381.1_cds_XP_016497907.1_11992
CDS Infomation

[gene=LOC107816683] [db_xref=GeneID:107816683] [protein=CO(2)-response secreted protease-like] [protein_id=XP_016497907.1] [location=complement(join(216852..217414,217516..217726,217956..218070,218162..218407,218504..218601,218682..219201,219965..220076,220161..220420,221038..221219))] [gbkey=CDS]
Sequence

ATGAAAAGGGTTACTTTAGTTTTCTTGTTTAGTCTCTTCTTAGTTTATTTTATAAGAAAA
TCCAAGGCAGTTTCTCAAGCAGAAGGCCATGGCGTTTACATTGTTTACATGGGTGCCACG
GGTTCATCGAATGATGTCGTTAGAGATGATCAAATTCAGCTTATGAGCTCCCTGACAACA
AGGAGAAAGAACGCAGTGGTGCTTAGCTACAGAAATAGTTTCTCAGGATTTGCAGCACGT
TTGTCAGATGCTGAAGCTCAATCGATTGCTCAGCAACCCGGAGTTATCTCTGTTTTCCCT
GATCCAGTATTTCAACTCCACACAACACGGTCATGGGATTTTTTAACGGATCAATATAAT
CTGGTACACAGTTTCCCTAACAGTTCTGGACCAAATTCAACCTCAAATGGAGTAGACACC
ATAATTGGGATTTTTGATACTGGAATATGGCCTGAATCAGAGAGTTTCAATGACAAGGGT
ATGGGTCCAGTCCCATCTCGTTGGAAAGGCACTTGCACCAAAGGTTATGATTTCAATTCT
TCCAGCTGCAACAGGAAACTGATCGGCGCAAGGTTTTACGATGACCCTGGCAACTCTCCA
ACACCTGTTACAGGGACACCTAGGGACCATGACGGGCATGGTACACATGTTGCAGCTACA
GCAGCAGGGAGTCCAGTGGCAGGTGCATCCTATTATGGGTTAGCAACAGGAACAGCCAAG
GGTGGTTCTCCAGGGTCAAGGATTGCAGTTTACCGTATATGCACGCCTTATGGATGCAGT
GGATCTGCTATTATGAAAGCATTTGATGATGCCATTGCAGATGGGGTTGATATCATAAAC
TTATCAATTGGTCAACCAGCTGGAGCAGAGTTTGAGTTTTCAACAAATCCTATAGCCATT
GGAGCTTTCCATGCTGTAGAGAAGGGCATTTTTGTCGTTGCCTCTGCTGGAAATGATGGC
CCTTCACGAGAAAGTGTTGTCAATGTTGCTCCTTGGATTTTCACAGTTGCTGCTACAACT
ATTGACAGAAACATTGAGACACATATTCCCTTGGGAGGGAACAAGCTGATTAAGGGTGGA
GGTATTAGCTTTAGCAATCTCAAGAAATCTCCAGTTTATCCATTGGTGGACAGTAAATCT
GCAAACTTAACTATGTATGACGGGGAGGCAAGTGACTGTGAACCAGATACACTCGACGAA
CACAAAGTCAAGGGTAAAATTGTTCTTTGTGATCATCTCAGTGATGATTTTTCAATCGAA
GATAGGCTAAATGAAGTGAAGAACAAGGGCGGCATTGGATTTATATTAATTATTCCTGAT
GATGAACTCATAGTGGCACCCAAAATGGGATCCTTCCCAGGGGCAGTAGTCACTCAACAT
GATGGCGTGAAGATTCTTTCGTACCTCAACTCGACAAAGAACCCAGTGGCAACAATTCTG
CCAACTGTAAGTGTAGATAATTTCAAACCAGCTCCTGTTGTGGCTTTCTTCTCATCAAGA
GGCCCTGCATACAACACTCGAAACCTCCTAAAACCGGATATTGCAGCACCAGGGACTGCA
ATACTTGCTGCTTGGCCAGCAAATGACACAGAAGTGGCTCGGTCTGGCCAAGAACCACCA
CTATTCAACTTCCTCTCAGGGACTTCCGTGTCTTGTCCTCATGTTTCTGCTATTGTTGCA
ACACTGAAATCTCAAAATCCCACCTGGAGTCCTTCAGCAATCAGATCAGCTATAATGACC
ACAGCTTTTCAGGAAAGCAACTTGAAGACTCCAATGTTAGTCAACAGTGCATATGGAGAA
TACCTTGCCGACCCATATGACTTTGGTGCAGGAGTAGCAACTATGTCAGGACCACGGGAA
CCAGGCCTGGTTTATGAGACTGAGATCACAGACTACTTGCTATTCCTCTGCTCTGCTGGC
TATAACACATCAACAGTTAAATTAATCTCAAAGACAGTTCCAGACAGTTTTTCATGCCCC
ACCAACGCAAGCGCTGAATCAATGTCTAACATGAACTATCCATCAATAGCTGTTTCTATG
TCCGAGGAAAGAGAAACCAAGAAAGTTACCAGAACTCTAACTAACTTTGGTAAAGAAGAA
TCAGAATACACGGCAATCATAACAGCACCAGATGCATTGAGAGTCCGAGTGCATCCAAGC
AAATTGAAATTTACAAGTAGCACGAAGAAACTGAGCTATCAAGTGACTTTCAAAGCAACA
TCTAGAGAGAGAGAATTTTTTGGATCAATTACATGGGCCAGTGGTAAGTACAAGGTTCGA
AGTCCATTTGTTGTCTCTTACTGGTAA

Peptide Sequence

PEP ID

XP_016497907.1
PEP Infomation

PREDICTED: CO(2)-response secreted protease-like [Nicotiana tabacum]
Sequence

MKRVTLVFLFSLFLVYFIRKSKAVSQAEGHGVYIVYMGATGSSNDVVRDDQIQLMSSLTT
RRKNAVVLSYRNSFSGFAARLSDAEAQSIAQQPGVISVFPDPVFQLHTTRSWDFLTDQYN
LVHSFPNSSGPNSTSNGVDTIIGIFDTGIWPESESFNDKGMGPVPSRWKGTCTKGYDFNS
SSCNRKLIGARFYDDPGNSPTPVTGTPRDHDGHGTHVAATAAGSPVAGASYYGLATGTAK
GGSPGSRIAVYRICTPYGCSGSAIMKAFDDAIADGVDIINLSIGQPAGAEFEFSTNPIAI
GAFHAVEKGIFVVASAGNDGPSRESVVNVAPWIFTVAATTIDRNIETHIPLGGNKLIKGG
GISFSNLKKSPVYPLVDSKSANLTMYDGEASDCEPDTLDEHKVKGKIVLCDHLSDDFSIE
DRLNEVKNKGGIGFILIIPDDELIVAPKMGSFPGAVVTQHDGVKILSYLNSTKNPVATIL
PTVSVDNFKPAPVVAFFSSRGPAYNTRNLLKPDIAAPGTAILAAWPANDTEVARSGQEPP
LFNFLSGTSVSCPHVSAIVATLKSQNPTWSPSAIRSAIMTTAFQESNLKTPMLVNSAYGE
YLADPYDFGAGVATMSGPREPGLVYETEITDYLLFLCSAGYNTSTVKLISKTVPDSFSCP
TNASAESMSNMNYPSIAVSMSEERETKKVTRTLTNFGKEESEYTAIITAPDALRVRVHPS
KLKFTSSTKKLSYQVTFKATSREREFFGSITWASGKYKVRSPFVVSYW

Transcript Sequence

Gene sequence data has not been registered.